Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115171369Target of Myb protein 1-like. (474 aa)    
Predicted Functional Partners:
LOC115167142
Toll-interacting protein-like.
   
 
 0.819
TOLLIP
Toll-interacting protein.
   
 
 0.819
MYO6
Unconventional myosin-VI-like.
    
 
 0.746
LOC115194558
Unconventional myosin-VI-like.
    
 
 0.746
MYO6-2
Myosin VI.
    
 
 0.746
ENSSTUP00000115949
annotation not available
    
 
 0.746
ENSSTUP00000002112
ADP-ribosylation factor-like 15a.
    
 0.728
ENSSTUP00000008318
annotation not available
    
 0.728
LOC115149389
ADP-ribosylation factor-like protein 15.
    
 0.728
ENSSTUP00000031046
ADP-ribosylation factor-like 15b.
    
 0.728
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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