Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115154776Serine/arginine repetitive matrix protein 2-like. (630 aa)    
Predicted Functional Partners:
ENSSTUP00000003019
Pyruvate dehydrogenase E1 beta subunit.
  
 0.975
pdhb
Pyruvate dehydrogenase E1 beta subunit.
  
 0.975
LOC115197019
Dihydrolipoyl dehydrogenase, mitochondrial-like.
   
 0.974
LOC115192726
Dihydrolipoyl dehydrogenase, mitochondrial-like.
   
 0.974
ENSSTUP00000011173
Pyruvate dehydrogenase complex, component X.
  
 0.953
LOC115153791
annotation not available
  
 0.953
LOC115204710
annotation not available
  
 0.953
pdhx
Pyruvate dehydrogenase complex component X.
  
 0.953
LOC115207473
GDH/6PGL endoplasmic bifunctional protein-like.
  
 0.934
LOC115150953
GDH/6PGL endoplasmic bifunctional protein-like.
  
 0.934
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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