Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115156651Tubulin-specific chaperone C-like. (352 aa)    
Predicted Functional Partners:
tbcd
Tubulin folding cofactor D.
    
 0.956
ENSSTUP00000058917
Tubulin folding cofactor D.
    
 0.956
ENSSTUP00000014995
ADP-ribosylation factor-like 2.
    
 
 0.925
LOC115208537
Tubulin-specific chaperone E-like.
    
 0.913
ENSSTUP00000107618
Tubulin folding cofactor E.
    
 0.913
LOC115204062
ADP-ribosylation factor-like protein 3.
    
 0.906
ENSSTUP00000114080
ADP ribosylation factor like GTPase 3b.
    
 0.906
LOC115153477
ADP-ribosylation factor-like protein 3.
    
 0.906
LOC115164833
ADP-ribosylation factor-like protein 3.
    
 0.834
ENSSTUP00000061354
ADP ribosylation factor like GTPase 3, like 1.
    
 0.834
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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