STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115200390TM2 domain-containing protein 2-like. (227 aa)    
Predicted Functional Partners:
piga
Phosphatidylinositol glycan anchor biosynthesis class A.
     
 0.878
LOC115156316
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A-like.
     
 0.878
LOC115148851
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like.
     
 0.869
ENSSTUP00000008406
annotation not available
     
 0.866
pigh
Phosphatidylinositol glycan anchor biosynthesis class H.
   
 
 0.866
pigc
Phosphatidylinositol glycan anchor biosynthesis class C.
     
 0.866
ENSSTUP00000091666
Phosphatidylinositol glycan anchor biosynthesis, class H.
   
 
 0.866
pigp
Phosphatidylinositol glycan anchor biosynthesis class P.
   
 
 0.862
ENSSTUP00000065777
annotation not available
   
 
 0.862
LOC115159972
Dolichol phosphate-mannose biosynthesis regulatory protein-like.
   
 
  0.742
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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