STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115200390TM2 domain-containing protein 2-like. (227 aa)    
Predicted Functional Partners:
LOC115148851
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like.
     
 0.861
ENSSTUP00000011366
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase).
     
  0.848
piga
Phosphatidylinositol glycan anchor biosynthesis class A.
     
 0.818
LOC115156316
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A-like.
     
 0.818
ENSSTUP00000008406
annotation not available
     
 0.808
pigh
Phosphatidylinositol glycan anchor biosynthesis class H.
     
 0.808
pigc
Phosphatidylinositol glycan anchor biosynthesis class C.
     
 0.808
ENSSTUP00000091666
Phosphatidylinositol glycan anchor biosynthesis, class H.
     
 0.808
pigp
Phosphatidylinositol glycan anchor biosynthesis class P.
   
 
 0.806
ENSSTUP00000065777
annotation not available
   
 
 0.806
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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