Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSTUP00000010306A kinase (PRKA) anchor protein 6. (2400 aa)    
Predicted Functional Partners:
LOC115165650
Rap guanine nucleotide exchange factor 3-like.
    
 
 0.722
LOC115167990
Rap guanine nucleotide exchange factor 3-like.
    
 
 0.722
ENSSTUP00000047487
Ryanodine receptor 3.
   
 
 0.689
ENSSTUP00000059980
Ryanodine receptor 2b (cardiac).
   
 
 0.689
RYR3
Ryanodine receptor 3.
   
 
 0.689
ENSSTUP00000078401
annotation not available
   
 
 0.689
ENSSTUP00000091067
annotation not available
   
 
 0.689
ENSSTUP00000098789
Ryanodine receptor 1a (skeletal).
   
 
 0.689
RYR3-2
Ryanodine receptor 3.
   
 
 0.689
ENSSTUP00000106845
Ryanodine receptor 3.
   
 
 0.689
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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