Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010312annotation not available (469 aa)    
Predicted Functional Partners:
ENSSTUP00000045065
Procollagen, type IX, alpha 2.
  
  
0.744
ENSSTUP00000088845
Collagen, type I, alpha 2.
  
  
 
0.711
ENSSTUP00000062561
Collagen, type IX, alpha 3.
  
  
 
0.710
ENSSTUP00000097749
Collagen, type I, alpha 2.
  
  
 
0.708
ENSSTUP00000015331
Collagen, type V, alpha 2a.
  
  
 
0.706
ENSSTUP00000029691
Collagen, type V, alpha 2a.
  
  
 
0.706
COL9A3
Collagen alpha-3(IX) chain-like.
  
  
 
0.697
ENSSTUP00000017601
Collagen, type I, alpha 1b.
  
  
 
0.670
ENSSTUP00000032406
Collagen, type I, alpha 1a.
  
  
 
0.670
LOC115152868
Collagen alpha-1(I) chain-like.
  
  
 
0.660
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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