Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rfngRFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase. (421 aa)    
Predicted Functional Partners:
LOC115199909
Neurogenic locus notch homolog protein 1-like.
    
 0.937
LOC115164727
Neurogenic locus notch homolog protein 1-like.
    
 0.937
LOC115159080
Neurogenic locus notch homolog protein 1-like.
    
 0.937
ENSSTUP00000002308
Notch receptor 2.
    
 0.912
LOC115199403
Neurogenic locus notch homolog protein 1-like.
    
 0.912
LOC115171254
Neurogenic locus notch homolog protein 2-like.
    
 0.912
LOC115158315
Neurogenic locus notch homolog protein 2-like.
    
 0.912
LOC115191205
beta-1,3-N-acetylglucosaminyltransferase manic fringe-like.
     
  0.874
ENSSTUP00000050569
Negative elongation factor complex member B.
   
 0.820
LOC115164714
Negative elongation factor B-like.
   
 0.820
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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