Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115198038Uncharacterized LOC115198038. (666 aa)    
Predicted Functional Partners:
LOC115205223
Malate synthase-like.
   
 0.943
uap1l1
UDP-N-acetylglucosamine pyrophosphorylase 1 like 1.
    
 
 0.731
LOC115192363
UDP-N-acetylhexosamine pyrophosphorylase-like.
    
 
 0.731
LOC115158556
UDP-N-acetylhexosamine pyrophosphorylase-like.
    
 
 0.731
LOC115177086
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.694
LOC115176539
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.694
ENSSTUP00000043929
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic.
   
 0.694
ENSSTUP00000064882
annotation not available
   
 0.694
LOC115188043
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.694
LOC115173508
Glyceraldehyde-3-phosphate dehydrogenase-like.
   
 0.694
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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