Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115171379Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like. (559 aa)    
Predicted Functional Partners:
LOC115205223
Malate synthase-like.
   
 
 0.959
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
   
 0.956
acaa1
acetyl-CoA acyltransferase 1.
   
 0.949
ENSSTUP00000045695
annotation not available
   
 0.942
ENSSTUP00000078377
3-hydroxyisobutyrate dehydrogenase b.
   
 0.942
hibadh
3-hydroxyisobutyrate dehydrogenase.
   
 0.942
LOC115175464
3-hydroxyisobutyrate dehydrogenase, mitochondrial-like.
   
 0.942
ENSSTUP00000035605
Alanine--glyoxylate aminotransferase 2.
   
 
 0.931
ENSSTUP00000061651
annotation not available
   
 0.930
LOC115187901
ethylmalonyl-CoA decarboxylase-like.
   
 0.930
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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