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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGPP2Sphingosine-1-phosphate phosphatase 2. (353 aa)    
Predicted Functional Partners:
LOC115153009
Sphingosine-1-phosphate lyase 1-like.
    
 0.992
LOC115194002
Sphingosine-1-phosphate lyase 1-like.
    
 0.992
asah2
N-acylsphingosine amidohydrolase 2.
     
 0.972
cers6
Ceramide synthase 6.
    
 0.968
LOC115207294
Ceramide synthase 5-like.
    
 0.968
LOC115168474
Ceramide synthase 5-like.
    
 0.968
ENSSTUP00000116003
Ceramide synthase 6.
    
 0.968
LOC115198242
Alkaline ceramidase 2-like.
     
 0.960
LOC115193815
Sphingolipid delta(4)-desaturase DES1-like.
     
 0.957
degs2
Delta 4-desaturase, sphingolipid 2.
     
 0.957
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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