STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010371Calsyntenin 3. (936 aa)    
Predicted Functional Partners:
LOC115192025
Leucine-rich repeat transmembrane neuronal protein 1-like.
   
  
 0.573
LOC115202085
Leucine-rich repeat transmembrane neuronal protein 1-like.
   
  
 0.573
LOC115177281
Ubiquitin carboxyl-terminal hydrolase 5-like.
      
 0.545
LOC115176530
Lysophospholipid acyltransferase 5-like.
      
 0.543
ENSSTUP00000105852
Lysophosphatidylcholine acyltransferase 3.
      
 0.543
ENSSTUP00000025753
TEL2, telomere maintenance 2, homolog (S. cerevisiae).
      
 0.540
GABRB1
Gamma-aminobutyric acid receptor subunit beta-1-like.
      
 0.538
GABRB1-2
Gamma-aminobutyric acid receptor subunit beta-1-like.
      
 0.538
ENSSTUP00000092144
annotation not available
      
 0.538
LOC115147302
Endoplasmic reticulum resident protein 27-like.
      
 0.538
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.