Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSTUP00000010428RAB36, member RAS oncogene family. (195 aa)    
Predicted Functional Partners:
ENSSTUP00000036639
Component of oligomeric golgi complex 6.
   
 0.924
ENSSTUP00000083005
VPS53 subunit of GARP complex.
    
 0.893
ENSSTUP00000107307
annotation not available
    
 0.893
rabggta
Rab geranylgeranyltransferase subunit alpha.
    
 0.888
ENSSTUP00000041183
Component of oligomeric golgi complex 8.
    
 0.870
LOC115203665
Conserved oligomeric Golgi complex subunit 8-like.
    
 0.870
RIC1
RAB6A-GEF complex partner protein 1-like.
   
 0.864
RIC1-2
RAB6A-GEF complex partner protein 1-like.
   
 0.864
rgp1
RGP1 homolog, RAB6A GEF complex partner 1.
    
 0.839
ENSSTUP00000066313
annotation not available
    
 0.839
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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