Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010430Hemopexin a. (438 aa)    
Predicted Functional Partners:
LOC115170069
alpha-2-HS-glycoprotein-like.
   
  
 0.802
LOC115200616
Serum albumin 2-like.
   
 0.767
ENSSTUP00000051609
annotation not available
   
 0.767
timp4
TIMP metallopeptidase inhibitor 4.
    
 0.766
LOC115208067
Saxiphilin-like.
   
 0.764
LOC115169857
Serotransferrin-1.
   
 0.762
LOC115159132
Protein AMBP-like.
   
  
 0.742
LOC115149424
Protein AMBP-like.
   
  
 0.742
LOC115201655
Metalloproteinase inhibitor 2-like.
    
 0.732
LOC115153475
Metalloproteinase inhibitor 2-like.
    
 0.732
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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