Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COX7CCytochrome c oxidase subunit 7C, mitochondrial-like. (63 aa)    
Predicted Functional Partners:
LOC115173997
Cytochrome b-c1 complex subunit 7-like.
   
 0.998
LOC115208425
Cytochrome c oxidase subunit 6C-1.
   
 0.998
LOC115151091
Cytochrome c oxidase subunit 6C-1-like.
   
 0.998
ENSSTUP00000110578
annotation not available
   
 0.998
COX2
Cytochrome c oxidase subunit II.
   
 0.997
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.996
LOC115192860
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.996
ENSSTUP00000116313
annotation not available
   
 0.996
LOC115154278
Cytochrome c oxidase subunit 7B2, mitochondrial-like.
   
 0.995
LOC115203916
Cytochrome c oxidase subunit 5B, mitochondrial-like.
   
 0.995
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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