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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010451annotation not available (452 aa)    
Predicted Functional Partners:
polr2h
RNA polymerase II subunit H.
    
 0.913
ENSSTUP00000070694
Polymerase (RNA) II (DNA directed) polypeptide I.
    
 0.913
gtf2e1
General transcription factor IIE subunit 1.
    
 0.885
ENSSTUP00000052632
General transcription factor IIE, polypeptide 2, beta.
    
 0.879
LOC115203622
RNA polymerase-associated protein LEO1-like.
    
 0.876
LOC115182541
RNA polymerase-associated protein LEO1-like.
    
 0.876
ercc6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.872
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
   
 0.867
POLR2B-2
DNA-directed RNA polymerase II subunit RPB2-like.
   
 0.867
gtf2h3
General transcription factor IIH subunit 3.
    
 0.861
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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