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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atg10Autophagy related 10. (279 aa)    
Predicted Functional Partners:
atg7
Autophagy related 7.
   
 0.990
ENSSTUP00000000544
ATG12 autophagy related 12 homolog (S. cerevisiae).
    
 0.974
LOC115177056
Ubiquitin-like protein ATG12.
    
 0.974
ATG5
Autophagy protein 5-like.
    
 0.876
ENSSTUP00000098761
ATG5 autophagy related 5 homolog (S. cerevisiae).
    
 0.876
UBA3
Ubiquitin like modifier activating enzyme 3.
   
 0.805
UBA3-2
Ubiquitin like modifier activating enzyme 3.
   
 0.805
LOC115195817
Ubiquitin-like modifier-activating enzyme 5.
   
 0.793
LOC115151846
SUMO-activating enzyme subunit 2-like.
   
 0.793
ENSSTUP00000017215
annotation not available
   
 0.793
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.