Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115202854Transmembrane protein 138-like. (186 aa)    
Predicted Functional Partners:
LOC115157664
Major facilitator superfamily domain-containing protein 12-like.
      
 0.581
MFSD12
Major facilitator superfamily domain-containing protein 12-like.
      
 0.581
ENSSTUP00000001720
annotation not available
   
  
 0.475
LOC115205729
Transmembrane protein 216-like.
   
  
 0.475
ENSSTUP00000057904
B9 protein domain 1.
      
 0.447
tmem231
Transmembrane protein 231.
      
 0.442
cep41
Centrosomal protein 41.
      
 0.409
ENSSTUP00000021075
annotation not available
      
 0.408
LOC115175966
Dyslexia-associated protein KIAA0319-like protein.
      
 0.408
ENSSTUP00000093266
Si:ch73-215d9.1.
      
 0.408
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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