STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115153010PDZ and LIM domain protein 1-like. (318 aa)    
Predicted Functional Partners:
ENSSTUP00000006240
Protein tyrosine kinase 2 beta, b.
    
 0.788
ENSSTUP00000018102
annotation not available
    
 0.788
ENSSTUP00000043092
Protein tyrosine kinase 2 beta, a.
    
 0.788
LOC115175167
Protein-tyrosine kinase 2-beta-like.
    
 0.788
ENSSTUP00000106914
Protein tyrosine kinase 2aa.
    
 0.788
ENSSTUP00000109649
annotation not available
    
 0.788
ENSSTUP00000109669
Protein tyrosine kinase 2aa.
    
 0.788
LOC115149209
ARF GTPase-activating protein GIT2-like.
    
 0.785
LOC115164847
ARF GTPase-activating protein GIT2-like.
    
 0.785
ENSSTUP00000047366
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.785
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.