Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115147600G-protein coupled receptor family C group 5 member B-like. (423 aa)    
Predicted Functional Partners:
foxred1
FAD dependent oxidoreductase domain containing 1.
      
 0.687
LOC115198542
Protein fantom-like.
      
 0.630
ENSSTUP00000036192
annotation not available
    
   0.607
ENSSTUP00000036218
annotation not available
    
   0.607
stxbp3
Syntaxin binding protein 3.
    
   0.607
sec63
SEC63 homolog, protein translocation regulator.
    
   0.534
LGALS2
Galectin-2-like.
      
 0.518
LGALS2-2
Galectin-2-like.
      
 0.518
LOC115161119
Glycine receptor subunit alpha-2-like.
      
 0.516
LOC115155783
Glycine receptor subunit alpha-2-like.
      
 0.516
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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