Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YY1YY1 transcription factor. (373 aa)    
Predicted Functional Partners:
ENSSTUP00000093510
Actin related protein 8.
    
 0.960
ino80
INO80 complex ATPase subunit.
   
  0.956
ino80e
INO80 complex subunit E.
    
  0.941
LOC115171134
Histone-lysine N-methyltransferase EZH1-like.
   
 0.930
EZH1
Histone-lysine N-methyltransferase EZH1-like.
   
 0.930
LOC115195415
Histone-lysine N-methyltransferase EZH2-like.
   
 0.930
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.930
YY1-3
Transcriptional repressor protein YY1-like.
  
  
 
0.929
LOC115162647
Transcriptional repressor protein YY1-like.
  
  
 
0.929
ENSSTUP00000036918
SUZ12 polycomb repressive complex 2 subunit b.
   
 0.914
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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