ENSSTUP00000010564 protein (Salmo trutta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSTUP00000010564

annotation not available (438 aa)

Predicted Functional Partners:

LOC115176477

0.905

GNB4

0.905

GNB4-2

0.905

LOC115177279

0.905

LOC115154423

0.904

LOC115148966

0.904

ENSSTUP00000054131

0.890

LOC115150537

0.890

LOC115150976

0.889

LOC115207454

0.889

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000010564	ENSSTUP00000054131	ENSSTUP00000010564	ENSSTUP00000054131	annotation not available	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	0.890
ENSSTUP00000010564	GNB4	ENSSTUP00000010564	ENSSTUP00000040499	annotation not available	Guanine nucleotide-binding protein subunit beta-4.	0.905
ENSSTUP00000010564	GNB4-2	ENSSTUP00000010564	ENSSTUP00000063612	annotation not available	Guanine nucleotide-binding protein subunit beta-4.	0.905
ENSSTUP00000010564	LOC115148966	ENSSTUP00000010564	ENSSTUP00000076244	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2-like.	0.904
ENSSTUP00000010564	LOC115150537	ENSSTUP00000010564	ENSSTUP00000056021	annotation not available	Guanine nucleotide-binding protein G(i) subunit alpha-2-like.	0.890
ENSSTUP00000010564	LOC115150976	ENSSTUP00000010564	ENSSTUP00000038307	annotation not available	Guanine nucleotide-binding protein G(i) subunit alpha-2-like.	0.889
ENSSTUP00000010564	LOC115154423	ENSSTUP00000010564	ENSSTUP00000050589	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.	0.904
ENSSTUP00000010564	LOC115176477	ENSSTUP00000010564	ENSSTUP00000008750	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like.	0.905
ENSSTUP00000010564	LOC115177279	ENSSTUP00000010564	ENSSTUP00000087791	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like.	0.905
ENSSTUP00000010564	LOC115207454	ENSSTUP00000010564	ENSSTUP00000043658	annotation not available	Guanine nucleotide-binding protein G(i) subunit alpha-2.	0.889
ENSSTUP00000054131	ENSSTUP00000010564	ENSSTUP00000054131	ENSSTUP00000010564	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	annotation not available	0.890
ENSSTUP00000054131	GNB4	ENSSTUP00000054131	ENSSTUP00000040499	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	Guanine nucleotide-binding protein subunit beta-4.	0.850
ENSSTUP00000054131	GNB4-2	ENSSTUP00000054131	ENSSTUP00000063612	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	Guanine nucleotide-binding protein subunit beta-4.	0.850
ENSSTUP00000054131	LOC115148966	ENSSTUP00000054131	ENSSTUP00000076244	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2-like.	0.863
ENSSTUP00000054131	LOC115150537	ENSSTUP00000054131	ENSSTUP00000056021	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	Guanine nucleotide-binding protein G(i) subunit alpha-2-like.	0.542
ENSSTUP00000054131	LOC115150976	ENSSTUP00000054131	ENSSTUP00000038307	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	Guanine nucleotide-binding protein G(i) subunit alpha-2-like.	0.543
ENSSTUP00000054131	LOC115154423	ENSSTUP00000054131	ENSSTUP00000050589	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.	0.863
ENSSTUP00000054131	LOC115176477	ENSSTUP00000054131	ENSSTUP00000008750	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like.	0.738
ENSSTUP00000054131	LOC115177279	ENSSTUP00000054131	ENSSTUP00000087791	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like.	0.738
ENSSTUP00000054131	LOC115207454	ENSSTUP00000054131	ENSSTUP00000043658	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	Guanine nucleotide-binding protein G(i) subunit alpha-2.	0.543