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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115205624Voltage-dependent calcium channel gamma-1 subunit-like. (231 aa)    
Predicted Functional Partners:
LOC115207482
Voltage-dependent calcium channel subunit alpha-2/delta-2-like.
    
 0.902
LOC115199102
Voltage-dependent calcium channel subunit alpha-2/delta-1-like.
    
 0.902
ENSSTUP00000076903
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
    
 0.902
ENSSTUP00000080466
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
    
 0.902
LOC115180504
Voltage-dependent calcium channel subunit alpha-2/delta-1-like.
    
 0.902
LOC115208238
Voltage-dependent calcium channel subunit alpha-2/delta-2-like.
    
 0.902
ENSSTUP00000109759
Calcium channel, voltage-dependent, alpha 2/delta subunit 2a.
    
 0.902
ENSSTUP00000027409
annotation not available
   
 0.879
ENSSTUP00000033971
annotation not available
   
 0.879
ENSSTUP00000068043
Calcium channel, voltage-dependent, L type, alpha 1C subunit.
   
 0.879
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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