Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115152309BTB/POZ domain-containing protein kctd15-like. (269 aa)    
Predicted Functional Partners:
LOC115207261
Transcription factor AP-2-delta-like.
    
 0.741
LOC115180840
Transcription factor AP-2-delta-like.
    
 0.741
LOC115208367
Transcription factor AP-2 gamma-like.
    
 0.740
ENSSTUP00000050960
annotation not available
    
 0.740
LOC115150103
Transcription factor AP-2 gamma-like.
    
 0.740
LOC115187223
Transcription factor AP-2-alpha-like.
    
 0.740
ENSSTUP00000069841
annotation not available
    
 0.740
tfap2e
Transcription factor AP-2 epsilon.
    
 0.740
tfap2a
Transcription factor AP-2 alpha.
    
 0.740
TFAP2E
Transcription factor AP-2-epsilon.
    
 0.740
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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