Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115205636Aminoacyl tRNA synthase complex-interacting multifunctional protein 2-like. (323 aa)    
Predicted Functional Partners:
LOC115202798
Bifunctional glutamate/proline--tRNA ligase-like.
   
 0.999
EPRS1
Bifunctional glutamate/proline--tRNA ligase-like.
   
 0.999
qars1
glutaminyl-tRNA synthetase 1.
   
 0.998
ENSSTUP00000012541
annotation not available
   
 0.997
LOC115154295
arginine--tRNA ligase, cytoplasmic-like.
   
 0.997
iars1
isoleucyl-tRNA synthetase 1.
   
 0.997
eef1e1
Eukaryotic translation elongation factor 1 epsilon 1.
   
 0.994
LOC115149931
Eukaryotic translation elongation factor 1 epsilon-1-like.
   
 0.994
LOC115203068
lysine--tRNA ligase-like.
   
 0.989
LOC115167274
lysine--tRNA ligase-like.
   
 0.989
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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