Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl23Kelch like family member 23. (562 aa)    
Predicted Functional Partners:
LOC115205866
Cullin-3-like.
    
 0.729
CUL3
Cullin-3-like.
    
 0.729
LOC115157472
Cullin-3-like.
    
 0.729
LOC115162911
Cullin-3.
    
 0.729
LOC115208055
Kelch repeat and BTB domain-containing protein 12-like.
      
 0.706
LOC115150374
Kelch repeat and BTB domain-containing protein 12-like.
      
 0.706
asb4
Ankyrin repeat and SOCS box containing 4.
    
 0.694
LOC115153525
Sorting nexin-16-like.
      
 0.664
ENSSTUP00000013327
annotation not available
    
 0.658
bbs9
Bardet-Biedl syndrome 9.
    
 0.658
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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