Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010697annotation not available (636 aa)    
Predicted Functional Partners:
ENSSTUP00000008587
Ataxin 2-like.
   
 
 0.863
LOC115192145
Ataxin-2-like protein.
   
 
 0.863
LOC115162349
Ataxin-2-like protein.
   
 
 0.863
LOC115205472
Synaptic functional regulator FMR1-like.
   
 
 0.861
LOC115175053
Synaptic functional regulator FMR1-like.
   
 
 0.861
ENSSTUP00000035772
Ataxin 2.
   
 
 0.844
LOC115164954
Ataxin-2-like.
   
 
 0.844
ENSSTUP00000000531
Family with sequence similarity 98 member A.
    
 
 0.816
ENSSTUP00000082657
annotation not available
    
 
 0.816
ENSSTUP00000016834
Ring finger and CCCH-type domains 2.
   
 
 0.767
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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