Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dhx29DExH-box helicase 29. (1382 aa)    
Predicted Functional Partners:
ENSSTUP00000053905
annotation not available
    
 0.881
ENSSTUP00000070599
Intersectin 2b.
    
 0.881
LOC115162993
AP-2 complex subunit sigma.
    
 0.877
LOC115162993-2
AP-2 complex subunit sigma.
    
 0.877
ENSSTUP00000040064
Intersectin 1 (SH3 domain protein).
    
  0.855
ENSSTUP00000091247
Intersectin 1 (SH3 domain protein).
    
  0.855
LOC115149378
Exosome RNA helicase MTR4-like.
   
 0.843
LOC115153341
40S ribosomal protein S24.
    
  0.843
ENSSTUP00000033277
Mtr4 exosome RNA helicase.
   
 0.843
LOC115193612
40S ribosomal protein S24.
    
  0.843
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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