Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115172082Echinoderm microtubule-associated protein-like 1. (314 aa)    
Predicted Functional Partners:
ift140
Intraflagellar transport 140.
   
 0.771
RANBP2
RAN binding protein 2.
   
  0.682
ENSSTUP00000027355
annotation not available
   
  0.682
LOC115161061
E3 SUMO-protein ligase RanBP2-like.
   
  0.682
LOC115153320
Anaphase-promoting complex subunit 1-like.
    
 0.662
LOC115198132
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 0.660
LOC115194121
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 0.660
NEK9
NIMA related kinase 9.
   
  0.653
NEK9-2
Serine/threonine-protein kinase Nek9-like.
   
  0.653
wdr35
WD repeat domain 35.
   
 0.653
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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