Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010707annotation not available (456 aa)    
Predicted Functional Partners:
APPL2
DCC-interacting protein 13-beta-like.
   
 
 0.827
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
   
 
 0.827
LOC115196952
DCC-interacting protein 13-beta-like.
   
 
 0.827
LOC115151041
Homeobox protein ANF-1-like.
   
 
 0.827
MYO6
Unconventional myosin-VI-like.
    
 
 0.745
LOC115194558
Unconventional myosin-VI-like.
    
 
 0.745
MYO6-2
Myosin VI.
    
 
 0.745
ENSSTUP00000115949
annotation not available
    
 
 0.745
LOC115195887
Neuropilin-1a-like.
    
 
 0.707
ENSSTUP00000051634
Neuropilin 1a.
    
 
 0.707
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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