Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115168677Protein Daple-like. (1641 aa)    
Predicted Functional Partners:
LOC115168654
Leucine-rich repeat transmembrane protein FLRT1-like.
    
 
 0.707
ENSSTUP00000091036
Fibronectin leucine rich transmembrane protein 1b.
    
 
 0.707
ENSSTUP00000077685
annotation not available
    
 
 0.588
ENSSTUP00000053291
E74-like factor 2a (ets domain transcription factor).
      
 0.586
ENSSTUP00000076830
E74-like factor 2a (ets domain transcription factor).
      
 0.586
SCYL1
N-terminal kinase-like protein.
      
 0.519
LOC115172256
N-alpha-acetyltransferase 15, NatA auxiliary subunit-like.
      
 0.491
ENSSTUP00000072424
annotation not available
      
 0.491
ENSSTUP00000082013
N(alpha)-acetyltransferase 15, NatA auxiliary subunit a.
      
 0.491
LOC115154698
Leucine-rich repeat transmembrane protein FLRT1-like.
    
 
 0.468
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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