ENSSTUP00000010779 protein (Salmo trutta) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSTUP00000010779

annotation not available (984 aa)

Predicted Functional Partners:

ENSSTUP00000091536

0.864

LOC115149385

0.828

LOC115159164

0.828

LOC115160928

0.828

LOC115155594

0.828

ENSSTUP00000089763

0.828

ENSSTUP00000091180

0.828

LOC115195888

0.820

ENSSTUP00000057815

0.820

ITGB1

0.820

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000010779	ENSSTUP00000057815	ENSSTUP00000010779	ENSSTUP00000057815	annotation not available	Integrin, beta 1a.	0.820
ENSSTUP00000010779	ENSSTUP00000089763	ENSSTUP00000010779	ENSSTUP00000089763	annotation not available	Integrin, alpha 10.	0.828
ENSSTUP00000010779	ENSSTUP00000091180	ENSSTUP00000010779	ENSSTUP00000091180	annotation not available	Integrin, alpha 10.	0.828
ENSSTUP00000010779	ENSSTUP00000091536	ENSSTUP00000010779	ENSSTUP00000091536	annotation not available	Integrin, beta 8.	0.864
ENSSTUP00000010779	ITGB1	ENSSTUP00000010779	ENSSTUP00000070440	annotation not available	Integrin beta-1-like.	0.820
ENSSTUP00000010779	LOC115149385	ENSSTUP00000010779	ENSSTUP00000013791	annotation not available	Integrin alpha-1-like.	0.828
ENSSTUP00000010779	LOC115155594	ENSSTUP00000010779	ENSSTUP00000087732	annotation not available	Integrin beta-5-like.	0.828
ENSSTUP00000010779	LOC115159164	ENSSTUP00000010779	ENSSTUP00000032273	annotation not available	Integrin alpha-1-like.	0.828
ENSSTUP00000010779	LOC115160928	ENSSTUP00000010779	ENSSTUP00000052354	annotation not available	Integrin beta-5-like.	0.828
ENSSTUP00000010779	LOC115195888	ENSSTUP00000010779	ENSSTUP00000053862	annotation not available	Integrin beta-1-like.	0.820
ENSSTUP00000057815	ENSSTUP00000010779	ENSSTUP00000057815	ENSSTUP00000010779	Integrin, beta 1a.	annotation not available	0.820
ENSSTUP00000057815	ENSSTUP00000089763	ENSSTUP00000057815	ENSSTUP00000089763	Integrin, beta 1a.	Integrin, alpha 10.	0.960
ENSSTUP00000057815	ENSSTUP00000091180	ENSSTUP00000057815	ENSSTUP00000091180	Integrin, beta 1a.	Integrin, alpha 10.	0.960
ENSSTUP00000057815	ENSSTUP00000091536	ENSSTUP00000057815	ENSSTUP00000091536	Integrin, beta 1a.	Integrin, beta 8.	0.908
ENSSTUP00000057815	ITGB1	ENSSTUP00000057815	ENSSTUP00000070440	Integrin, beta 1a.	Integrin beta-1-like.	0.929
ENSSTUP00000057815	LOC115149385	ENSSTUP00000057815	ENSSTUP00000013791	Integrin, beta 1a.	Integrin alpha-1-like.	0.961
ENSSTUP00000057815	LOC115155594	ENSSTUP00000057815	ENSSTUP00000087732	Integrin, beta 1a.	Integrin beta-5-like.	0.856
ENSSTUP00000057815	LOC115159164	ENSSTUP00000057815	ENSSTUP00000032273	Integrin, beta 1a.	Integrin alpha-1-like.	0.961
ENSSTUP00000057815	LOC115160928	ENSSTUP00000057815	ENSSTUP00000052354	Integrin, beta 1a.	Integrin beta-5-like.	0.856
ENSSTUP00000057815	LOC115195888	ENSSTUP00000057815	ENSSTUP00000053862	Integrin, beta 1a.	Integrin beta-1-like.	0.544