Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115166921ADAMTS-like protein 5. (559 aa)    
Predicted Functional Partners:
ENSSTUP00000037804
ADAM metallopeptidase with thrombospondin type 1 motif, 18.
     
 0.623
LOC115167417
A disintegrin and metalloproteinase with thrombospondin motifs 18-like.
     
 0.623
ENSSTUP00000042643
ADAMTS-like 3.
     
 0.602
LOC115166890
ADAMTS-like protein 3.
     
 0.602
LOC115160514
GDP-fucose protein O-fucosyltransferase 2-like.
     
 0.545
ENSSTUP00000113656
Protein O-fucosyltransferase 2.
     
 0.545
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
     
  0.541
MTURN
Maturin.
      
 0.492
LOC115175359
Maturin-like.
      
 0.492
ENSSTUP00000088687
annotation not available
      
 0.490
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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