Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115204170Signal peptide peptidase-like 3. (396 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.827
LOC115154243
Derlin-2-like.
   
 
 0.663
DERL1
Derlin-1-like.
   
 
 0.663
LOC115148778
Derlin-2.
   
 
 0.663
LOC115181388
Derlin-1-like.
   
 
 0.663
LOC115168201
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit.
   
   0.647
LOC115165869
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like.
   
   0.647
ENSSTUP00000019942
annotation not available
   
  
 0.641
LOC115206449
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like.
      
 0.641
LOC115154056
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like.
      
 0.641
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.