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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010951annotation not available (558 aa)    
Predicted Functional Partners:
CYP7A1
Cholesterol 7-alpha-monooxygenase-like.
  
  
 0.971
LOC115156926
25-hydroxycholesterol 7-alpha-hydroxylase.
  
  
 0.971
LOC115169870
Cholesterol 7-alpha-monooxygenase-like.
  
  
 0.970
LOC115169796
25-hydroxycholesterol 7-alpha-hydroxylase-like.
  
  
 0.968
CYP8B1
5-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase-like.
     
 0.949
LOC115169574
5-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase-like.
     
 0.949
LOC115169575
5-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase-like.
     
 0.949
LOC115200360
Cholesterol 25-hydroxylase-like protein.
  
 0.905
ENSSTUP00000044942
annotation not available
  
 0.905
ENSSTUP00000050502
annotation not available
  
 0.905
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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