Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000010969annotation not available (196 aa)    
Predicted Functional Partners:
LOC115192481
Paired amphipathic helix protein Sin3b-like.
    
 
 0.763
LOC115203496
Paired amphipathic helix protein Sin3a-like.
    
 
 0.763
sin3a
SIN3 transcription regulator family member A.
    
 
 0.763
LOC115166830
Paired amphipathic helix protein Sin3a-like.
    
 
 0.763
LOC115158405
Paired amphipathic helix protein Sin3b-like.
    
 
 0.763
ENSSTUP00000102258
Kinesin family member 15.
     
 0.724
ascc2
Activating signal cointegrator 1 complex subunit 2.
      
 0.684
pold2
DNA polymerase delta 2, accessory subunit.
     
 0.591
ENSSTUP00000008375
annotation not available
    
 
 0.560
ESRRB
Steroid hormone receptor ERR2-like.
    
 
 0.560
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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