Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSSTUP00000010992Glutamate receptor, ionotropic, kainate 4. (960 aa)    
Predicted Functional Partners:
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
    
 0.860
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
    
 0.860
LOC115163808
Glutamate receptor ionotropic, kainate 1.
    
 0.860
grik1
Glutamate ionotropic receptor kainate type subunit 1.
    
 0.860
LOC115175059
Glutamate receptor ionotropic, kainate 2-like.
    
 0.860
GRIK3-2
Glutamate ionotropic receptor kainate type subunit 3.
    
 0.860
LOC115195609
Glutamate receptor ionotropic, kainate 2-like.
    
 0.860
ENSSTUP00000015915
Coiled-coil domain containing 113.
   
 
 0.683
nme8
NME/NM23 family member 8.
   
   0.664
LOC115155393
Thioredoxin domain-containing protein 3 homolog.
   
   0.664
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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