Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC115156225Cerebellar degeneration-related protein 2-like. (484 aa)    
Predicted Functional Partners:
ENSSTUP00000014450
Chromatin licensing and DNA replication factor 1.
   
   0.731
LOC115167385
DNA replication factor Cdt1-like.
   
   0.731
rpusd2
RNA pseudouridine synthase domain containing 2.
    
   0.720
LOC115180499
FGFR1 oncogene partner 2 homolog.
    
   0.709
FGFR1OP2
FGFR1 oncogene partner 2 homolog.
    
   0.709
sike1
Suppressor of IKBKE 1.
    
   0.651
LOC115173922
Geminin-like.
    
   0.626
ENSSTUP00000103945
Geminin DNA replication inhibitor.
    
   0.626
LOC115207293
Keratin, type II cytoskeletal 8-like.
   
  
 0.576
ENSSTUP00000041542
Si:dkey-222f2.1.
   
  
 0.576
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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