Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011007annotation not available (1019 aa)    
Predicted Functional Partners:
ENSSTUP00000021303
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.996
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.996
LOC115152745
Protein transport protein Sec31A-like.
   
 0.994
LOC115159235
Protein transport protein Sec31A-like.
   
 0.992
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.992
ENSSTUP00000023999
SEC24 homolog C, COPII coat complex component.
  
0.989
LOC115147271
Protein transport protein Sec23A.
   
 0.989
LOC115201193
Protein transport protein Sec24C-like.
  
0.989
LOC115178804
Protein transport protein Sec23A-like.
   
 0.989
LOC115162075
Protein transport protein Sec23A.
   
0.988
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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