Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC115196977Sodium- and chloride-dependent GABA transporter 2-like. (618 aa)    
Predicted Functional Partners:
irak1
Interleukin 1 receptor associated kinase 1.
      
 0.697
gnl3l
G protein nucleolar 3 like.
      
 0.686
slc30a9
Solute carrier family 30 member 9.
  
  
 0.683
ENSSTUP00000097049
annotation not available
    
   0.625
LOC115168731
methyl-CpG-binding protein 2-like.
      
 0.623
LOC115165279
methyl-CpG-binding protein 2-like.
      
 0.623
LOC115168392
Sodium- and chloride-dependent GABA transporter 1-like.
     
  0.561
LOC115207211
Sodium- and chloride-dependent GABA transporter 1-like.
     
  0.561
LOC115202826
Sodium- and chloride-dependent glycine transporter 2-like.
     
  0.561
LOC115169760
Sodium- and chloride-dependent glycine transporter 1-like.
     
  0.561
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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