ENSSTUP00000011320 protein (Salmo trutta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSTUP00000011320

annotation not available (295 aa)

Predicted Functional Partners:

LOC115168031

0.735

LOC115165686

0.735

ENSSTUP00000114788

0.735

nit1

0.713

LOC115192191

0.704

pla2g4a

0.704

LOC115169910

0.704

LOC115162797

0.613

pemt

0.589

ENSSTUP00000073886

0.554

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000011320	ENSSTUP00000073886	ENSSTUP00000011320	ENSSTUP00000073886	annotation not available	Sorting nexin 22.	0.554
ENSSTUP00000011320	ENSSTUP00000114788	ENSSTUP00000011320	ENSSTUP00000114788	annotation not available	Ubiquitin-conjugating enzyme E2 variant 1.	0.735
ENSSTUP00000011320	LOC115162797	ENSSTUP00000011320	ENSSTUP00000000058	annotation not available	Phospholipase B1, membrane-associated-like.	0.613
ENSSTUP00000011320	LOC115165686	ENSSTUP00000011320	ENSSTUP00000024529	annotation not available	Ubiquitin-conjugating enzyme E2 variant 1.	0.735
ENSSTUP00000011320	LOC115168031	ENSSTUP00000011320	ENSSTUP00000022347	annotation not available	Ubiquitin-conjugating enzyme E2 variant 1.	0.735
ENSSTUP00000011320	LOC115169910	ENSSTUP00000011320	ENSSTUP00000098551	annotation not available	Cytosolic phospholipase A2-like.	0.704
ENSSTUP00000011320	LOC115192191	ENSSTUP00000011320	ENSSTUP00000005035	annotation not available	Cytosolic phospholipase A2-like.	0.704
ENSSTUP00000011320	nit1	ENSSTUP00000011320	ENSSTUP00000045304	annotation not available	Nitrilase 1.	0.713
ENSSTUP00000011320	pemt	ENSSTUP00000011320	ENSSTUP00000066979	annotation not available	Phosphatidylethanolamine N-methyltransferase.	0.589
ENSSTUP00000011320	pla2g4a	ENSSTUP00000011320	ENSSTUP00000052085	annotation not available	Phospholipase A2 group IVA.	0.704
ENSSTUP00000073886	ENSSTUP00000011320	ENSSTUP00000073886	ENSSTUP00000011320	Sorting nexin 22.	annotation not available	0.554
ENSSTUP00000114788	ENSSTUP00000011320	ENSSTUP00000114788	ENSSTUP00000011320	Ubiquitin-conjugating enzyme E2 variant 1.	annotation not available	0.735
ENSSTUP00000114788	LOC115162797	ENSSTUP00000114788	ENSSTUP00000000058	Ubiquitin-conjugating enzyme E2 variant 1.	Phospholipase B1, membrane-associated-like.	0.874
ENSSTUP00000114788	LOC115165686	ENSSTUP00000114788	ENSSTUP00000024529	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin-conjugating enzyme E2 variant 1.	0.978
ENSSTUP00000114788	LOC115168031	ENSSTUP00000114788	ENSSTUP00000022347	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin-conjugating enzyme E2 variant 1.	0.978
ENSSTUP00000114788	LOC115169910	ENSSTUP00000114788	ENSSTUP00000098551	Ubiquitin-conjugating enzyme E2 variant 1.	Cytosolic phospholipase A2-like.	0.875
ENSSTUP00000114788	LOC115192191	ENSSTUP00000114788	ENSSTUP00000005035	Ubiquitin-conjugating enzyme E2 variant 1.	Cytosolic phospholipase A2-like.	0.875
ENSSTUP00000114788	pla2g4a	ENSSTUP00000114788	ENSSTUP00000052085	Ubiquitin-conjugating enzyme E2 variant 1.	Phospholipase A2 group IVA.	0.875
LOC115162797	ENSSTUP00000011320	ENSSTUP00000000058	ENSSTUP00000011320	Phospholipase B1, membrane-associated-like.	annotation not available	0.613
LOC115162797	ENSSTUP00000114788	ENSSTUP00000000058	ENSSTUP00000114788	Phospholipase B1, membrane-associated-like.	Ubiquitin-conjugating enzyme E2 variant 1.	0.874