Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011359annotation not available (307 aa)    
Predicted Functional Partners:
LOC115194446
C-X-C motif chemokine 9-like.
   
 0.995
LOC115156196
C-X-C chemokine receptor type 2-like.
   
 0.988
ENSSTUP00000003248
annotation not available
   
 0.983
LOC115155947
C-X-C chemokine receptor type 1-like.
   
 0.983
ENSSTUP00000031744
Chemokine (C-X-C motif) receptor 2.
   
 0.983
LOC115179419
C-X-C chemokine receptor type 1-like.
   
 0.983
ENSSTUP00000070249
Chemokine (C-X-C motif) ligand 19.
   
 0.967
LOC115152958
Stromal cell-derived factor 1-like.
   
 0.953
LOC115177846
Stromal cell-derived factor 1-like.
   
 0.953
LOC115194046
Stromal cell-derived factor 1-like.
   
 0.953
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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