Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H10Zinc finger CCCH domain-containing protein 10-like. (555 aa)    
Predicted Functional Partners:
ENSSTUP00000041939
pre-miRNA 5'-monophosphate methyltransferase.
   
  
 0.717
ENSSTUP00000088243
annotation not available
    
   0.689
gpatch4
G-patch domain containing 4.
    
   0.689
LOC115168162
60S ribosomal protein L26.
   
   0.682
ENSSTUP00000103249
Ribosomal protein L26.
   
   0.682
ENSSTUP00000036047
Nuclear transcription factor Y, alpha, like.
    
   0.652
ENSSTUP00000038856
Nuclear transcription factor Y, alpha.
    
   0.652
LOC115168685
Nuclear transcription factor Y subunit alpha-like.
    
   0.652
ENSSTUP00000005620
annotation not available
   
   0.632
LOC115187903
60S ribosomal protein L30-like.
   
   0.632
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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