Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011399annotation not available (153 aa)    
Predicted Functional Partners:
depdc5
DEP domain containing 5, GATOR1 subcomplex subunit.
   
 0.777
ENSSTUP00000040931
WD repeat domain 59.
    
 0.774
ENSSTUP00000026273
annotation not available
    
 0.727
kptn
Kaptin, actin binding protein.
    
 0.727
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.724
LOC115192317
KICSTOR complex protein SZT2-like.
    
 0.724
LOC115200920
GATOR complex protein WDR24-like.
    
 0.723
LOC115159675
GATOR complex protein WDR24-like.
    
 0.723
NPRL2
GATOR complex protein NPRL2-like.
    
 0.691
LOC115150940
GATOR complex protein NPRL2.
    
 0.691
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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