Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011409annotation not available (161 aa)    
Predicted Functional Partners:
ENSSTUP00000006682
annotation not available
   
 0.996
LOC115164366
Platelet glycoprotein Ib beta chain-like.
   
 0.996
LOC115170618
Leucine-rich repeat-containing protein 4C-like.
   
 0.979
ENSSTUP00000013188
Si:ch211-117l17.7.
   
 0.967
ENSSTUP00000013148
annotation not available
   
 0.959
LOC115151544
Leucine-rich repeat-containing protein 15-like.
   
 0.959
GP5
Leucine-rich repeat-containing protein 15-like.
   
 0.945
GP5-2
Glycoprotein V platelet.
   
 0.945
ENSSTUP00000051489
annotation not available
   
 0.929
ENSSTUP00000079547
annotation not available
   
 0.929
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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