Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fastkd1FAST kinase domains 1. (880 aa)    
Predicted Functional Partners:
ENSSTUP00000047817
annotation not available
  
 
 
 0.900
LOC115195785
FAST kinase domain-containing protein 3, mitochondrial-like.
    
 
 0.880
ptcd3
Pentatricopeptide repeat domain 3.
  
   
 0.753
fastkd2
FAST kinase domains 2.
      
 0.739
LOC115162073
Translational activator of cytochrome c oxidase 1.
      
 0.711
KDM1B
Lysine demethylase 1B.
      
 0.710
mettl17
Methyltransferase like 17.
   
  
 0.705
LOC115160865
FAST kinase domain-containing protein 3, mitochondrial-like.
    
 
 0.697
LOC115167051
xaa-Pro dipeptidase-like.
    
 
 0.697
PEPD
Peptidase D.
    
 
 0.697
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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