STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011442Melanoma cell adhesion molecule b. (641 aa)    
Predicted Functional Partners:
LOC115149176
Rho-related GTP-binding protein RhoF-like.
    
 0.608
LOC115159412
Rho-related GTP-binding protein RhoF-like.
    
 0.608
ENSSTUP00000025378
Laminin, alpha 5.
   
 0.605
LOC115192534
Laminin subunit alpha-3-like.
   
 0.605
ENSSTUP00000086963
annotation not available
   
 0.605
ENSSTUP00000089916
annotation not available
   
 0.605
LAMA3
Laminin subunit alpha 3.
   
 0.605
ENSSTUP00000088343
annotation not available
    
  0.582
ptprc
Protein tyrosine phosphatase receptor type C.
    
 0.570
LOC115208510
Inactive tyrosine-protein kinase 7-like.
    
 
0.568
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.