Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011447annotation not available (181 aa)    
Predicted Functional Partners:
sympk
Symplekin.
    
 
 0.789
LOC115170006
Transcription initiation factor IIB.
    
 
 0.785
LOC115156696
Transcription initiation factor IIB-like.
    
 
 0.785
LOC115151875
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.726
LOC115151875-2
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.726
LOC115207292
Translation machinery-associated protein 7.
   
    0.661
LOC115150041
Translation machinery-associated protein 7-like.
   
    0.661
pum1
Pumilio RNA binding family member 1.
    
   0.639
ENSSTUP00000103887
Pumilio RNA-binding family member 1.
    
   0.639
LOC115195665
Pumilio homolog 2-like.
    
   0.639
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.