Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115149381Golgi phosphoprotein 3-like. (291 aa)    
Predicted Functional Partners:
gmppb
GDP-mannose pyrophosphorylase B.
    
 
 0.856
LOC115167087
Coatomer subunit beta-like.
    
 
 0.830
LOC115203240
Coatomer subunit beta.
    
 
 0.830
LOC115157287
Coatomer subunit alpha.
    
 
 0.802
LOC115169511
Coatomer subunit alpha-like.
    
 
 0.802
LOC115156109
Mannose-1-phosphate guanyltransferase alpha-A-like.
    
 
 0.774
LOC115160676
Mannose-1-phosphate guanyltransferase alpha-A.
    
 
 0.774
LOC115162950
Coatomer subunit delta-like.
   
 
 0.768
LOC115205905
Coatomer subunit delta-like.
   
 
 0.768
LOC115154960
Coatomer subunit delta-like.
   
 
 0.768
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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