Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115151642Tetraspanin-33-like. (289 aa)    
Predicted Functional Partners:
ENSSTUP00000042667
PDZ domain containing 11.
     
 0.825
LOC115205267
PDZ domain-containing protein 11-like.
     
 0.825
LOC115150972
Macrophage-stimulating protein receptor-like.
    
  0.651
LOC115207569
Macrophage-stimulating protein receptor-like.
    
  0.651
LOC115152322
Hepatocyte growth factor receptor-like.
    
  0.651
ENSSTUP00000051999
Macrophage stimulating 1 receptor a.
    
  0.651
LOC115150855
Macrophage-stimulating protein receptor-like.
    
  0.651
LOC115197549
Hepatocyte growth factor receptor-like.
    
  0.651
LOC115195819
Atypical chemokine receptor 4-like.
      
 0.511
ENSSTUP00000035074
Atypical chemokine receptor 4b.
      
 0.511
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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