STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011523Ring finger protein 26. (449 aa)    
Predicted Functional Partners:
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.616
UBA3-2
Ubiquitin like modifier activating enzyme 3.
     
 0.616
ENSSTUP00000017561
Forkhead box R1.
    
 
 0.584
upk2
Uroplakin 2.
    
 
 0.584
LOC115193627
Equilibrative nucleoside transporter 1-like.
      
 0.546
LOC115206426
40S ribosomal protein S25-like.
      
 0.540
ENSSTUP00000071650
annotation not available
      
 0.540
RPS25
40S ribosomal protein S25-like.
      
 0.540
TMEM43
Transmembrane protein 43.
    
 
 0.530
LOC115171406
Nucleoplasmin-like.
      
 0.516
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.